2010

• Miles A, Zhao J, Klyne G, White-Cooper H, Shotton D (2010). OpenFlyData: An exemplar data web integrating gene expression data on the fruit fly Drosophila melanogaster J. Biomedical Informatics (submitted for publication). pdf

• Shotton D, Catton C, Klyne G (2010). Ontologies for Sharing, Ontologies for Use. Ontogenesis KnowledgeBlog. html

• Shotton D (2010). CiTO, the Citation Typing Ontology. Journal of Biomedical Semantics (submitted for publication). doc

• Kurtz D, Parker G, Shotton D, Klyne G, Schroff F, Zisserman A and Wilks Y (2009). CLAROS – bringing classical art to a global public. Proc. IEEE e-Science Coference, Oxford, 9-11 December 2009.

• Zhao J, Klyne G, Miles A, Benson E, Gudmannsdottir E, White-Cooper H, Shotton D (2009) FlyTED: the Drosophila Testis Gene Expression Database. Nucleic Acids Research (Database Issue). html

• Shotton D (2010) Data webs for image repositories. In: Dutton W, Jeffreys P, editors. World Wide Research: Reshaping the Sciences and Humanities. Cambridge, Massachusetts: MIT Press (In press).

2009

• Zhao J, Miles A, Klyne G, Shotton D (2009) OpenFlyData: The Way to Go for Biological Data Integration. Proc. Data Integration in the Life Sciences Conference - DILS 2009. Manchester, UK. Lecture Notes in Computer Science, 5647: 47-54.

• Zhao J, Miles A, Klyne G, Shotton D (2009) Linked data and provenance in biological data webs. Briefings in Bioinformatics 10: 139-152. html

• Shotton D, Portwin K, Klyne G, Miles A (2009) Adventures in semantic publishing: exemplar semantic enhancement of a research article. PLoS Computational Biology 5: e1000361. html

• Shotton D (2009) CiTO, the Citation Typing Ontology, and its use for annotation of reference lists and visualization of citation networks. Proc Bio-Ontologies 2009. pdf

• Shotton D (2009) Semantic Publishing: The coming revolution in scientific journal publishing. Learned Publishing 22: 85-94. html

• Brewster C, Jupp S, Luciano J, Shotton D, Stevens R, et al. (2009) Issues in learning an ontology from text. BMC Bioinformatics 10: S1. html

2008

• Zhao J, Klyne G, Shotton D (2008) Provenance and linked data in biological data webs. Proc. 17th International World Wide Web Conference WWW2008 (Workshop: LDOW2008) Beijing. pdf

• Zhao J, Klyne G, Shotton D (2008) Building a Semantic Web accessible image repository. Proc. 5th European Semantic Web Conference; 2-5 June 2008; Tenerife. Springer. pp. 154-169. Lecture Notes in Computer Science, 5021: 154-169.

Categories:Publications